Gene : Thecc1EG044856 T. cacao v1.1
Defline:  (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1442
Name:  ? Thecc1EG044856 Secondary Identifier:  ? PAC:27442646
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044856 0.5kb upstream 0.5kb upstream 9075 true scaffold_10r: 19845676-19854750 Theobroma cacao
Thecc1EG044856 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19845676-19846175 Theobroma cacao
Thecc1EG044856 0.5kb downstream 0.5kb downstream 9075 true scaffold_10r: 19846176-19855250 Theobroma cacao
Thecc1EG044856 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19854751-19855250 Theobroma cacao
Thecc1EG044856 1.0kb upstream 1.0kb upstream 9575 true scaffold_10r: 19845176-19854750 Theobroma cacao
Thecc1EG044856 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19845176-19846175 Theobroma cacao
Thecc1EG044856 1.0kb downstream 1.0kb downstream 9575 true scaffold_10r: 19846176-19855750 Theobroma cacao
Thecc1EG044856 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19854751-19855750 Theobroma cacao
Thecc1EG044856 2.0kb upstream 2.0kb upstream 10575 true scaffold_10r: 19844176-19854750 Theobroma cacao
Thecc1EG044856 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19844176-19846175 Theobroma cacao
Thecc1EG044856 2.0kb downstream 2.0kb downstream 10575 true scaffold_10r: 19846176-19856750 Theobroma cacao
Thecc1EG044856 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19854751-19856750 Theobroma cacao
Thecc1EG044856 5.0kb upstream 5.0kb upstream 13575 true scaffold_10r: 19841176-19854750 Theobroma cacao
Thecc1EG044856 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19841176-19846175 Theobroma cacao
Thecc1EG044856 5.0kb downstream 5.0kb downstream 13575 true scaffold_10r: 19846176-19859750 Theobroma cacao
Thecc1EG044856 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19854751-19859750 Theobroma cacao
Thecc1EG044856 10.0kb upstream 10.0kb upstream 18575 true scaffold_10r: 19836176-19854750 Theobroma cacao
Thecc1EG044856 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19836176-19846175 Theobroma cacao
Thecc1EG044856 10.0kb downstream 10.0kb downstream 18575 true scaffold_10r: 19846176-19864750 Theobroma cacao
Thecc1EG044856 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19854751-19864750 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain