Gene : Thecc1EG008373 T. cacao v1.1
Defline:  (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1889
Name:  ? Thecc1EG008373 Secondary Identifier:  ? PAC:27464205
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008373 0.5kb upstream 0.5kb upstream 13032 true scaffold_2: 13023674-13036705 Theobroma cacao
Thecc1EG008373 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13023674-13024173 Theobroma cacao
Thecc1EG008373 0.5kb downstream 0.5kb downstream 13032 true scaffold_2: 13024174-13037205 Theobroma cacao
Thecc1EG008373 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13036706-13037205 Theobroma cacao
Thecc1EG008373 1.0kb upstream 1.0kb upstream 13532 true scaffold_2: 13023174-13036705 Theobroma cacao
Thecc1EG008373 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13023174-13024173 Theobroma cacao
Thecc1EG008373 1.0kb downstream 1.0kb downstream 13532 true scaffold_2: 13024174-13037705 Theobroma cacao
Thecc1EG008373 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13036706-13037705 Theobroma cacao
Thecc1EG008373 2.0kb upstream 2.0kb upstream 14532 true scaffold_2: 13022174-13036705 Theobroma cacao
Thecc1EG008373 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13022174-13024173 Theobroma cacao
Thecc1EG008373 2.0kb downstream 2.0kb downstream 14532 true scaffold_2: 13024174-13038705 Theobroma cacao
Thecc1EG008373 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13036706-13038705 Theobroma cacao
Thecc1EG008373 5.0kb upstream 5.0kb upstream 17532 true scaffold_2: 13019174-13036705 Theobroma cacao
Thecc1EG008373 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13019174-13024173 Theobroma cacao
Thecc1EG008373 5.0kb downstream 5.0kb downstream 17532 true scaffold_2: 13024174-13041705 Theobroma cacao
Thecc1EG008373 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13036706-13041705 Theobroma cacao
Thecc1EG008373 10.0kb upstream 10.0kb upstream 22532 true scaffold_2: 13014174-13036705 Theobroma cacao
Thecc1EG008373 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13014174-13024173 Theobroma cacao
Thecc1EG008373 10.0kb downstream 10.0kb downstream 22532 true scaffold_2: 13024174-13046705 Theobroma cacao
Thecc1EG008373 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13036706-13046705 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain