Gene : Thecc1EG008533 T. cacao v1.1
Defline:  (1 of 2) PTHR10178//PTHR10178:SF275 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1951
Name:  ? Thecc1EG008533 Secondary Identifier:  ? PAC:27464384
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008533 0.5kb upstream 0.5kb upstream 8172 true scaffold_2: 14607732-14615903 Theobroma cacao
Thecc1EG008533 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 14607732-14608231 Theobroma cacao
Thecc1EG008533 0.5kb downstream 0.5kb downstream 8172 true scaffold_2: 14608232-14616403 Theobroma cacao
Thecc1EG008533 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 14615904-14616403 Theobroma cacao
Thecc1EG008533 1.0kb upstream 1.0kb upstream 8672 true scaffold_2: 14607232-14615903 Theobroma cacao
Thecc1EG008533 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 14607232-14608231 Theobroma cacao
Thecc1EG008533 1.0kb downstream 1.0kb downstream 8672 true scaffold_2: 14608232-14616903 Theobroma cacao
Thecc1EG008533 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 14615904-14616903 Theobroma cacao
Thecc1EG008533 2.0kb upstream 2.0kb upstream 9672 true scaffold_2: 14606232-14615903 Theobroma cacao
Thecc1EG008533 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 14606232-14608231 Theobroma cacao
Thecc1EG008533 2.0kb downstream 2.0kb downstream 9672 true scaffold_2: 14608232-14617903 Theobroma cacao
Thecc1EG008533 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 14615904-14617903 Theobroma cacao
Thecc1EG008533 5.0kb upstream 5.0kb upstream 12672 true scaffold_2: 14603232-14615903 Theobroma cacao
Thecc1EG008533 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 14603232-14608231 Theobroma cacao
Thecc1EG008533 5.0kb downstream 5.0kb downstream 12672 true scaffold_2: 14608232-14620903 Theobroma cacao
Thecc1EG008533 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 14615904-14620903 Theobroma cacao
Thecc1EG008533 10.0kb upstream 10.0kb upstream 17672 true scaffold_2: 14598232-14615903 Theobroma cacao
Thecc1EG008533 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 14598232-14608231 Theobroma cacao
Thecc1EG008533 10.0kb downstream 10.0kb downstream 17672 true scaffold_2: 14608232-14625903 Theobroma cacao
Thecc1EG008533 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 14615904-14625903 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain