Gene : Thecc1EG009694 T. cacao v1.1
Defline:  Gag protease polyprotein Genomic Order:  2264
Name:  ? Thecc1EG009694 Secondary Identifier:  ? PAC:27460214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009694 0.5kb upstream 0.5kb upstream 12955 true scaffold_2: 26520074-26533028 Theobroma cacao
Thecc1EG009694 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 26532529-26533028 Theobroma cacao
Thecc1EG009694 0.5kb downstream 0.5kb downstream 12955 true scaffold_2: 26519574-26532528 Theobroma cacao
Thecc1EG009694 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 26519574-26520073 Theobroma cacao
Thecc1EG009694 1.0kb upstream 1.0kb upstream 13455 true scaffold_2: 26520074-26533528 Theobroma cacao
Thecc1EG009694 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 26532529-26533528 Theobroma cacao
Thecc1EG009694 1.0kb downstream 1.0kb downstream 13455 true scaffold_2: 26519074-26532528 Theobroma cacao
Thecc1EG009694 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 26519074-26520073 Theobroma cacao
Thecc1EG009694 2.0kb upstream 2.0kb upstream 14455 true scaffold_2: 26520074-26534528 Theobroma cacao
Thecc1EG009694 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 26532529-26534528 Theobroma cacao
Thecc1EG009694 2.0kb downstream 2.0kb downstream 14455 true scaffold_2: 26518074-26532528 Theobroma cacao
Thecc1EG009694 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 26518074-26520073 Theobroma cacao
Thecc1EG009694 5.0kb upstream 5.0kb upstream 17455 true scaffold_2: 26520074-26537528 Theobroma cacao
Thecc1EG009694 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 26532529-26537528 Theobroma cacao
Thecc1EG009694 5.0kb downstream 5.0kb downstream 17455 true scaffold_2: 26515074-26532528 Theobroma cacao
Thecc1EG009694 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 26515074-26520073 Theobroma cacao
Thecc1EG009694 10.0kb upstream 10.0kb upstream 22455 true scaffold_2: 26520074-26542528 Theobroma cacao
Thecc1EG009694 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 26532529-26542528 Theobroma cacao
Thecc1EG009694 10.0kb downstream 10.0kb downstream 22455 true scaffold_2: 26510074-26532528 Theobroma cacao
Thecc1EG009694 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 26510074-26520073 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain