Gene : Thecc1EG017814 T. cacao v1.1
Defline:  (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED Genomic Order:  642
Name:  ? Thecc1EG017814 Secondary Identifier:  ? PAC:27455456
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017814 0.5kb upstream 0.5kb upstream 9614 true scaffold_4: 7568679-7578292 Theobroma cacao
Thecc1EG017814 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7577793-7578292 Theobroma cacao
Thecc1EG017814 0.5kb downstream 0.5kb downstream 9614 true scaffold_4: 7568179-7577792 Theobroma cacao
Thecc1EG017814 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7568179-7568678 Theobroma cacao
Thecc1EG017814 1.0kb upstream 1.0kb upstream 10114 true scaffold_4: 7568679-7578792 Theobroma cacao
Thecc1EG017814 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7577793-7578792 Theobroma cacao
Thecc1EG017814 1.0kb downstream 1.0kb downstream 10114 true scaffold_4: 7567679-7577792 Theobroma cacao
Thecc1EG017814 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7567679-7568678 Theobroma cacao
Thecc1EG017814 2.0kb upstream 2.0kb upstream 11114 true scaffold_4: 7568679-7579792 Theobroma cacao
Thecc1EG017814 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7577793-7579792 Theobroma cacao
Thecc1EG017814 2.0kb downstream 2.0kb downstream 11114 true scaffold_4: 7566679-7577792 Theobroma cacao
Thecc1EG017814 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7566679-7568678 Theobroma cacao
Thecc1EG017814 5.0kb upstream 5.0kb upstream 14114 true scaffold_4: 7568679-7582792 Theobroma cacao
Thecc1EG017814 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7577793-7582792 Theobroma cacao
Thecc1EG017814 5.0kb downstream 5.0kb downstream 14114 true scaffold_4: 7563679-7577792 Theobroma cacao
Thecc1EG017814 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7563679-7568678 Theobroma cacao
Thecc1EG017814 10.0kb upstream 10.0kb upstream 19114 true scaffold_4: 7568679-7587792 Theobroma cacao
Thecc1EG017814 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7577793-7587792 Theobroma cacao
Thecc1EG017814 10.0kb downstream 10.0kb downstream 19114 true scaffold_4: 7558679-7577792 Theobroma cacao
Thecc1EG017814 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7558679-7568678 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823880 5264 Brassicales-Malvales View MSA
124319934 5266 SBM View MSA
124168432 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain