36 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Thecc1EG003164 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
2280
 |
scaffold_1: 19958271-19960550 | |
| Thecc1EG003150 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
3085
|
scaffold_1: 19767526-19770610 | |
| Thecc1EG003838 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
1565
|
scaffold_1: 27085079-27086643 | |
| Thecc1EG003326 | (1 of 2) PF00098//PF08284 - Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
33240
|
scaffold_1: 21939160-21972399 | |
| Thecc1EG003239 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
8955
|
scaffold_1: 21036906-21045860 | |
| Thecc1EG043384 | (1 of 22) PTHR10178//PTHR10178:SF283 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
857934
|
scaffold_10r: 5823627-6681560 | |
| Thecc1EG043522 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
5916
|
scaffold_10r: 7123850-7129765 | |
| Thecc1EG044276 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
585
|
scaffold_10r: 15336868-15337452 | |
| Thecc1EG045371 | Uncharacterized protein (58%P) | T. cacao v1.1 |
2698
|
scaffold_10r: 24157091-24159788 | |
| Thecc1EG008749 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
167720
|
scaffold_2: 16582592-16750311 | |
| Thecc1EG009243 | (1 of 22) PTHR10178//PTHR10178:SF283 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
9751
|
scaffold_2: 21835129-21844879 | |
| Thecc1EG009224 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
10207
|
scaffold_2: 21654054-21664260 | |
| Thecc1EG008910 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
1204
|
scaffold_2: 18139651-18140854 | |
| Thecc1EG009841 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
6748
|
scaffold_2: 28028429-28035176 | |
| Thecc1EG013491 | (1 of 57) PF08284 - Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
13755
|
scaffold_3: 13530432-13544186 | |
| Thecc1EG013367 | (1 of 57) PF08284 - Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
2488
|
scaffold_3: 12277647-12280134 | |
| Thecc1EG013381 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
11541
|
scaffold_3: 12388984-12400524 | |
| Thecc1EG013244 | (1 of 22) PTHR10178//PTHR10178:SF283 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
5468
|
scaffold_3: 10672778-10678245 | |
| Thecc1EG017410 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
7266
|
scaffold_4: 3540025-3547290 | |
| Thecc1EG017814 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
9114
|
scaffold_4: 7568679-7577792 | |
| Thecc1EG017765 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
2457
|
scaffold_4: 7002987-7005443 | |
| Thecc1EG022818 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
4825
|
scaffold_5: 7808479-7813303 | |
| Thecc1EG023639 | (1 of 22) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
4267
|
scaffold_5: 16883335-16887601 | |
| Thecc1EG023328 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
4175
|
scaffold_5: 13044289-13048463 | |
| Thecc1EG023237 | Uncharacterized protein | T. cacao v1.1 |
1154
|
scaffold_5: 11912795-11913948 | |
| Thecc1EG027124 | (1 of 2) PTHR11262:SF9 - ATP-DEPENDENT CLP PROTEASE | T. cacao v1.1 |
18922
|
scaffold_6: 1610319-1629240 | |
| Thecc1EG028061 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
10005
|
scaffold_6: 10373753-10383757 | |
| Thecc1EG027898 | (1 of 4) PF00098//PF03732//PF08284 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
6835
|
scaffold_6: 8446955-8453789 | |
| Thecc1EG033381 | Uncharacterized protein | T. cacao v1.1 |
2836
|
scaffold_7: 21057374-21060209 | |
| Thecc1EG033375 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
1696
|
scaffold_7: 21003020-21004715 |
36 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Thecc1EG022818t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG003838t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG043522t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG043384t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG033375t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG013491t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG013244t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG017814t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG035798t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG035732t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG008749t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG009841t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG023328t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG009224t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG027898t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG027124t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG036595t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG008910t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG033069t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG023237t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG045371t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG003326t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG013381t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG023639t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG013367t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG028061t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG009243t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG003164t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG017765t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
| Thecc1EG044276t1 | T. cacao v1.1 | 124319934 | PF02362 - B3 DNA binding domain (B3) | 36 | 5266 | SBM |
