Gene : Thecc1EG028061 T. cacao v1.1
Defline:  (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED Genomic Order:  657
Name:  ? Thecc1EG028061 Secondary Identifier:  ? PAC:27439820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028061 0.5kb upstream 0.5kb upstream 10505 true scaffold_6: 10373253-10383757 Theobroma cacao
Thecc1EG028061 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 10373253-10373752 Theobroma cacao
Thecc1EG028061 0.5kb downstream 0.5kb downstream 10505 true scaffold_6: 10373753-10384257 Theobroma cacao
Thecc1EG028061 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 10383758-10384257 Theobroma cacao
Thecc1EG028061 1.0kb upstream 1.0kb upstream 11005 true scaffold_6: 10372753-10383757 Theobroma cacao
Thecc1EG028061 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 10372753-10373752 Theobroma cacao
Thecc1EG028061 1.0kb downstream 1.0kb downstream 11005 true scaffold_6: 10373753-10384757 Theobroma cacao
Thecc1EG028061 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 10383758-10384757 Theobroma cacao
Thecc1EG028061 2.0kb upstream 2.0kb upstream 12005 true scaffold_6: 10371753-10383757 Theobroma cacao
Thecc1EG028061 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 10371753-10373752 Theobroma cacao
Thecc1EG028061 2.0kb downstream 2.0kb downstream 12005 true scaffold_6: 10373753-10385757 Theobroma cacao
Thecc1EG028061 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 10383758-10385757 Theobroma cacao
Thecc1EG028061 5.0kb upstream 5.0kb upstream 15005 true scaffold_6: 10368753-10383757 Theobroma cacao
Thecc1EG028061 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 10368753-10373752 Theobroma cacao
Thecc1EG028061 5.0kb downstream 5.0kb downstream 15005 true scaffold_6: 10373753-10388757 Theobroma cacao
Thecc1EG028061 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 10383758-10388757 Theobroma cacao
Thecc1EG028061 10.0kb upstream 10.0kb upstream 20005 true scaffold_6: 10363753-10383757 Theobroma cacao
Thecc1EG028061 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 10363753-10373752 Theobroma cacao
Thecc1EG028061 10.0kb downstream 10.0kb downstream 20005 true scaffold_6: 10373753-10393757 Theobroma cacao
Thecc1EG028061 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 10383758-10393757 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823880 5264 Brassicales-Malvales View MSA
124319934 5266 SBM View MSA
124168432 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain