Gene : Thecc1EG032120 T. cacao v1.1
Defline:  Gag protease polyprotein Genomic Order:  1242
Name:  ? Thecc1EG032120 Secondary Identifier:  ? PAC:27446239
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032120 0.5kb upstream 0.5kb upstream 7362 true scaffold_7: 9032400-9039761 Theobroma cacao
Thecc1EG032120 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9032400-9032899 Theobroma cacao
Thecc1EG032120 0.5kb downstream 0.5kb downstream 7362 true scaffold_7: 9032900-9040261 Theobroma cacao
Thecc1EG032120 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9039762-9040261 Theobroma cacao
Thecc1EG032120 1.0kb upstream 1.0kb upstream 7862 true scaffold_7: 9031900-9039761 Theobroma cacao
Thecc1EG032120 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9031900-9032899 Theobroma cacao
Thecc1EG032120 1.0kb downstream 1.0kb downstream 7862 true scaffold_7: 9032900-9040761 Theobroma cacao
Thecc1EG032120 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9039762-9040761 Theobroma cacao
Thecc1EG032120 2.0kb upstream 2.0kb upstream 8862 true scaffold_7: 9030900-9039761 Theobroma cacao
Thecc1EG032120 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9030900-9032899 Theobroma cacao
Thecc1EG032120 2.0kb downstream 2.0kb downstream 8862 true scaffold_7: 9032900-9041761 Theobroma cacao
Thecc1EG032120 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9039762-9041761 Theobroma cacao
Thecc1EG032120 5.0kb upstream 5.0kb upstream 11862 true scaffold_7: 9027900-9039761 Theobroma cacao
Thecc1EG032120 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9027900-9032899 Theobroma cacao
Thecc1EG032120 5.0kb downstream 5.0kb downstream 11862 true scaffold_7: 9032900-9044761 Theobroma cacao
Thecc1EG032120 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9039762-9044761 Theobroma cacao
Thecc1EG032120 10.0kb upstream 10.0kb upstream 16862 true scaffold_7: 9022900-9039761 Theobroma cacao
Thecc1EG032120 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9022900-9032899 Theobroma cacao
Thecc1EG032120 10.0kb downstream 10.0kb downstream 16862 true scaffold_7: 9032900-9049761 Theobroma cacao
Thecc1EG032120 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9039762-9049761 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain