Gene : Sobic.007G043500 S. bicolor v3.1.1
Defline:  (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) Genomic Order:  455
Name:  ? Sobic.007G043500 Secondary Identifier:  ? PAC:37936743
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G043500 0.5kb upstream 0.5kb upstream 6871 true Chr07: 4345307-4352177 Sorghum bicolor
Sobic.007G043500 0.5kb upstream 0.5kb upstream 500 false Chr07: 4345307-4345806 Sorghum bicolor
Sobic.007G043500 0.5kb downstream 0.5kb downstream 6871 true Chr07: 4345807-4352677 Sorghum bicolor
Sobic.007G043500 0.5kb downstream 0.5kb downstream 500 false Chr07: 4352178-4352677 Sorghum bicolor
Sobic.007G043500 1.0kb upstream 1.0kb upstream 7371 true Chr07: 4344807-4352177 Sorghum bicolor
Sobic.007G043500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4344807-4345806 Sorghum bicolor
Sobic.007G043500 1.0kb downstream 1.0kb downstream 7371 true Chr07: 4345807-4353177 Sorghum bicolor
Sobic.007G043500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4352178-4353177 Sorghum bicolor
Sobic.007G043500 2.0kb upstream 2.0kb upstream 8371 true Chr07: 4343807-4352177 Sorghum bicolor
Sobic.007G043500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4343807-4345806 Sorghum bicolor
Sobic.007G043500 2.0kb downstream 2.0kb downstream 8371 true Chr07: 4345807-4354177 Sorghum bicolor
Sobic.007G043500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4352178-4354177 Sorghum bicolor
Sobic.007G043500 5.0kb upstream 5.0kb upstream 11371 true Chr07: 4340807-4352177 Sorghum bicolor
Sobic.007G043500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4340807-4345806 Sorghum bicolor
Sobic.007G043500 5.0kb downstream 5.0kb downstream 11371 true Chr07: 4345807-4357177 Sorghum bicolor
Sobic.007G043500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4352178-4357177 Sorghum bicolor
Sobic.007G043500 10.0kb upstream 10.0kb upstream 16371 true Chr07: 4335807-4352177 Sorghum bicolor
Sobic.007G043500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4335807-4345806 Sorghum bicolor
Sobic.007G043500 10.0kb downstream 10.0kb downstream 16371 true Chr07: 4345807-4362177 Sorghum bicolor
Sobic.007G043500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4352178-4362177 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176731 5267 Panicoideae View MSA
124580080 5269 Grass View MSA
122043821 5273 Angiosperm View MSA
121346629 5274 Embryophyte View MSA
123428492 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.388       Low
cufflinks 8.599     High Low
cufflinks 19.142     High  
cufflinks 12.616     High  
cufflinks 21.29     High High
cufflinks 15.445     High  
cufflinks 14.092     High  
cufflinks 9.947     High Low
cufflinks 15.824     High  
cufflinks 15.967     High  
cufflinks 18.753     High  
cufflinks 18.964     High  
cufflinks 16.85     High  
cufflinks 16.532     High  
cufflinks 20.032     High  
cufflinks 12.978     High  
cufflinks 13.923     High  
cufflinks 15.306     High  
cufflinks 18.572     High  
cufflinks 14.211     High  
cufflinks 32.18     High High
cufflinks 15.674     High  
cufflinks 17.454     High  
cufflinks 16.627     High  
cufflinks 13.802     High  
cufflinks 8.817     High Low
cufflinks 17.129     High  
cufflinks 17.818     High  
cufflinks 13.828     High  
cufflinks 20.21     High  

0 Strain