Protein Family : phytochrome B 124238198

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  28

28 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29889.t000067 (1 of 1) K12121 - phytochrome B (PHYB) R. communis v0.1 6735   29889: 292112-298846
orange1.1g037299m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sinensis v1.1 6009   scaffold00016: 990517-996525
AT4G16250 (1 of 1) K12122 - phytochrome D (PHYD) A. thaliana TAIR10 PHYD 3885   Chr4: 9195602-9199486
AT2G18790 (1 of 1) K12121 - phytochrome B (PHYB) A. thaliana TAIR10 PHYB 4550   Chr2: 8139881-8144430
Thhalv10024253m.g (1 of 1) PF00360//PF00512//PF00989//PF01590//PF02518//PF08446 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_2) E. salsugineum v1.0 4230   scaffold_1: 10830637-10834866
Ciclev10004218m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. clementina v1.0 6479   scaffold_9: 827118-833596
Lus10016911.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4396   scaffold153: 580863-585258
Lus10037771.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4373   scaffold196: 1468583-1472955
Gorai.011G200200 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E G. raimondii v2.1 5999   Chr11: 48430597-48436595
Thecc1EG021372 (1 of 1) K12121 - phytochrome B (PHYB) T. cacao v1.1 7351   scaffold_4: 32790761-32798111
Araha.17195s0001 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 4522   Scaffold17195: 38-4559
Araha.23460s0001 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 3925   Scaffold23460: 331-4255
Cagra.0389s0013 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 4563   Scaffold389: 48878-53440
Cagra.3528s0020 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 4380   Scaffold3528: 77812-82191
Brara.E02473 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E B. rapa FPsc v1.3 4450   A05: 22102673-22107122
Bostr.30275s0074 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E B. stricta v1.2 4433   Scaffold30275: 535831-540263
Bostr.18351s0345 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E B. stricta v1.2 4654   Scaffold18351: 2825704-2830357
SapurV1A.0114s0100 (1 of 2) K12121 - phytochrome B (PHYB) S. purpurea v1.0 7919   chr08: 7206534-7214452
SapurV1A.0050s0370 (1 of 2) K12121 - phytochrome B (PHYB) S. purpurea v1.0 7117   chr10: 11384515-11391631
Manes.03G205100 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. esculenta v6.1 6564   Chromosome03: 28550453-28557016
AL3G53130 (1 of 1) K12121 - phytochrome B (PHYB) A. lyrata v2.1 4583   scaffold_3: 23698491-23703073
AL7G38810 (1 of 1) K12122 - phytochrome D (PHYD) A. lyrata v2.1 4579   scaffold_7: 12253606-12258184
Potri.008G105200 (1 of 2) K12121 - phytochrome B (PHYB) P. trichocarpa v3.1 8744   Chr08: 6666300-6675043
Potri.010G145900 (1 of 2) K12121 - phytochrome B (PHYB) P. trichocarpa v3.1 7432   Chr10: 15573767-15581198
Podel.08G124600 (1 of 2) K12121 - phytochrome B (PHYB) P. deltoides WV94 v2.1 8321   Chr08: 8408888-8417208
Podel.10G147200 (1 of 2) K12121 - phytochrome B (PHYB) P. deltoides WV94 v2.1 6059   Chr10: 14367241-14373299
Carub.0007s2528 (1 of 1) K12122 - phytochrome D (PHYD) C. rubella v1.1 4553   scaffold_7: 9607797-9612349
Carub.0003s3305 (1 of 1) K12121 - phytochrome B (PHYB) C. rubella v1.1 4642   scaffold_3: 13992812-13997453

28 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g037299m C. sinensis v1.1 124238198 phytochrome B 1 5268 Malvidae
AT4G16250.1 A. thaliana TAIR10 124238198 phytochrome B 2 5268 Malvidae
Lus10037771 L. usitatissimum v1.0 124238198 phytochrome B 2 5268 Malvidae
Thecc1EG021372t1 T. cacao v1.1 124238198 phytochrome B 1 5268 Malvidae
SapurV1A.0050s0370.1.p S. purpurea v1.0 124238198 phytochrome B 2 5268 Malvidae
SapurV1A.0114s0100.1.p S. purpurea v1.0 124238198 phytochrome B 2 5268 Malvidae
Manes.03G205100.1.p M. esculenta v6.1 124238198 phytochrome B 1 5268 Malvidae
Potri.010G145900.2.p P. trichocarpa v3.1 124238198 phytochrome B 2 5268 Malvidae
Carub.0007s2528.1.p C. rubella v1.1 124238198 phytochrome B 2 5268 Malvidae
29889.m003301 R. communis v0.1 124238198 phytochrome B 1 5268 Malvidae
AT2G18790.1 A. thaliana TAIR10 124238198 phytochrome B 2 5268 Malvidae
Thhalv10024253m E. salsugineum v1.0 124238198 phytochrome B 1 5268 Malvidae
Ciclev10004218m C. clementina v1.0 124238198 phytochrome B 1 5268 Malvidae
Lus10016911 L. usitatissimum v1.0 124238198 phytochrome B 2 5268 Malvidae
Gorai.011G200200.1 G. raimondii v2.1 124238198 phytochrome B 1 5268 Malvidae
Araha.23460s0001.1.p A. halleri v1.1 124238198 phytochrome B 2 5268 Malvidae
Araha.17195s0001.1.p A. halleri v1.1 124238198 phytochrome B 2 5268 Malvidae
Cagra.3528s0020.1.p C. grandiflora v1.1 124238198 phytochrome B 2 5268 Malvidae
Cagra.0389s0013.1.p C. grandiflora v1.1 124238198 phytochrome B 2 5268 Malvidae
Brara.E02473.1.p B. rapa FPsc v1.3 124238198 phytochrome B 1 5268 Malvidae
Bostr.18351s0345.1.p B. stricta v1.2 124238198 phytochrome B 2 5268 Malvidae
Bostr.30275s0074.1.p B. stricta v1.2 124238198 phytochrome B 2 5268 Malvidae
AL7G38810.t1 A. lyrata v2.1 124238198 phytochrome B 2 5268 Malvidae
AL3G53130.t1 A. lyrata v2.1 124238198 phytochrome B 2 5268 Malvidae
Potri.008G105200.5.p P. trichocarpa v3.1 124238198 phytochrome B 2 5268 Malvidae
Podel.08G124600.1.p P. deltoides WV94 v2.1 124238198 phytochrome B 2 5268 Malvidae
Podel.10G147200.1.p P. deltoides WV94 v2.1 124238198 phytochrome B 2 5268 Malvidae
Carub.0003s3305.1.p C. rubella v1.1 124238198 phytochrome B 2 5268 Malvidae