Protein Family : SCF ubiquitin ligase, Skp1 component 122199884

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  25

25 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.1G366700 (1 of 18) PTHR11165 - SKP1 S. italica v2.2 1102   scaffold_1: 41425372-41426473
Seita.2G396600 (1 of 1) PTHR11165:SF24 - S-PHASE KINASE-ASSOCIATED PROTEIN 1 S. italica v2.2 1197   scaffold_2: 46114312-46115508
Seita.2G396500 (1 of 18) PTHR11165 - SKP1 S. italica v2.2 480   scaffold_2: 46111487-46111966
Zm00008a009806 (1 of 8) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) Z. mays PH207 v1.1 933   chr02: 216861048-216861980
Zm00008a027228 (1 of 1) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED Z. mays PH207 v1.1 18611   chr07: 27643747-27662357
Pavir.2KG544100 (1 of 7) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED P. virgatum v4.1 1050   Chr02K: 88855517-88856566
Pavir.2KG544200 (1 of 22) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. virgatum v4.1 1213   Chr02K: 88852483-88853695
Pavir.2KG544300 (1 of 7) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED P. virgatum v4.1 990   Chr02K: 88850273-88851262
Pavir.2NG597400 (1 of 22) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. virgatum v4.1 3944   Chr02N: 98059424-98063367
Pavir.2NG597600 (1 of 22) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. virgatum v4.1 1089   Chr02N: 98075044-98076132
Sobic.002G381750 (1 of 3) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED S. bicolor v3.1.1 1371   Chr02: 73815946-73817316
Zm00001d019371 (1 of 1) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED Z. mays RefGen_V4 912   7: 30370224-30371135
Zm00001d006914 (1 of 12) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) Z. mays RefGen_V4 927   2: 219300304-219301230
Pahal.2G453300 (1 of 10) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. hallii v3.1 2665   Chr02: 54807892-54810556
Pahal.2G453400 (1 of 4) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED P. hallii v3.1 693   Chr02: 54814035-54814727
Pahal.2G453500 (1 of 10) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. hallii v3.1 636   Chr02: 54816736-54817371
PhHAL.2G440000 (1 of 12) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. hallii HAL v2.1 3165   Chr02: 55094663-55097827
PhHAL.2G440200 (1 of 3) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED P. hallii HAL v2.1 614   Chr02: 55101702-55102315
PhHAL.2G440300 (1 of 12) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) P. hallii HAL v2.1 636   Chr02: 55107543-55108178
Misin04G364400 (1 of 9) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED M. sinensis v7.1 887   Chr04: 107903581-107904467
Misin04G364300 (1 of 9) PTHR11165//PTHR11165:SF59 - SKP1 // SUBFAMILY NOT NAMED M. sinensis v7.1 486   Chr04: 107895435-107895920
Misin03G339700 (1 of 17) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) M. sinensis v7.1 1140   Chr03: 104459790-104460929
Sevir.2G407900 (1 of 13) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) S. viridis v2.1 633   Chr_02: 44840922-44841554
Sevir.2G408000 (1 of 2) PTHR11165//PTHR11165:SF24 - SKP1 // S-PHASE KINASE-ASSOCIATED PROTEIN 1 S. viridis v2.1 594   Chr_02: 44844100-44844693
Sevir.1G373200 (1 of 16) PTHR11165 - SKP1 S. viridis v2.1 1123   Chr_01: 40982615-40983737

25 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.1G366700.1.p S. italica v2.2 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Seita.2G396500.1.p S. italica v2.2 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Zm00008a009806_P01 Z. mays PH207 v1.1 122199884 SCF ubiquitin ligase, Skp1 component 2 5267 Panicoideae
Zm00008a027228_P01 Z. mays PH207 v1.1 122199884 SCF ubiquitin ligase, Skp1 component 2 5267 Panicoideae
Pavir.2KG544100.1.p P. virgatum v4.1 122199884 SCF ubiquitin ligase, Skp1 component 5 5267 Panicoideae
Pavir.2KG544200.1.p P. virgatum v4.1 122199884 SCF ubiquitin ligase, Skp1 component 5 5267 Panicoideae
Pavir.2KG544300.1.p P. virgatum v4.1 122199884 SCF ubiquitin ligase, Skp1 component 5 5267 Panicoideae
Pavir.2NG597600.1.p P. virgatum v4.1 122199884 SCF ubiquitin ligase, Skp1 component 5 5267 Panicoideae
Pavir.2NG597400.1.p P. virgatum v4.1 122199884 SCF ubiquitin ligase, Skp1 component 5 5267 Panicoideae
Sobic.002G381750.1.p S. bicolor v3.1.1 122199884 SCF ubiquitin ligase, Skp1 component 1 5267 Panicoideae
Zm00001d019371_P001 Z. mays RefGen_V4 122199884 SCF ubiquitin ligase, Skp1 component 2 5267 Panicoideae
Zm00001d006914_P001 Z. mays RefGen_V4 122199884 SCF ubiquitin ligase, Skp1 component 2 5267 Panicoideae
Pahal.2G453400.1.p P. hallii v3.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Pahal.2G453300.1.p P. hallii v3.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Pahal.2G453500.1.p P. hallii v3.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
PhHAL.2G440000.1.p P. hallii HAL v2.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Misin03G339700.1.p M. sinensis v7.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Misin04G364300.1.p M. sinensis v7.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Misin04G364400.1.p M. sinensis v7.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Sevir.1G373200.1.p S. viridis v2.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Sevir.2G408000.1.p S. viridis v2.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Sevir.2G407900.1.p S. viridis v2.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
Seita.2G396600.1.p S. italica v2.2 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
PhHAL.2G440200.1.p P. hallii HAL v2.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae
PhHAL.2G440300.1.p P. hallii HAL v2.1 122199884 SCF ubiquitin ligase, Skp1 component 3 5267 Panicoideae