Protein Family : PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 121606514

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  7

7 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.029940 (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H C. sativus v1.0 3954   scaffold00399: 184186-188139
Cucsa.185250 (1 of 4) PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) C. sativus v1.0 3225   scaffold01274: 815626-818850
Cucsa.032890 (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H C. sativus v1.0 3886   scaffold00429: 2151260-2155145
Cucsa.034750 (1 of 2) PF00078//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) C. sativus v1.0 3047   scaffold00444: 637631-640677
Cucsa.163250 (1 of 1) PF00665//PF08284 - Integrase core domain (rve) // Retroviral aspartyl protease (RVP_2) C. sativus v1.0 2562   scaffold01144: 2652948-2655509
Cucsa.183390 (1 of 2) PF00078//PF00665//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retroviral aspartyl protease (RVP_2) C. sativus v1.0 3926   scaffold01261: 262035-265960
Cucsa.183430 (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H C. sativus v1.0 2431   scaffold01261: 351404-353834

7 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.029940.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm
Cucsa.034750.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm
Cucsa.163250.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm
Cucsa.183390.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm
Cucsa.183430.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm
Cucsa.185250.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm
Cucsa.032890.1 C. sativus v1.0 121606514 PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) 7 5273 Angiosperm