Gene : Carub.0005s1644 C. rubella v1.1
Defline:  (1 of 1) PF00076//PF00929 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Exonuclease (RNase_T) Genomic Order:  1644
Name:  ? Carub.0005s1644 Secondary Identifier:  ? PAC:39225328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1644 0.5kb upstream 0.5kb upstream 7048 true scaffold_5: 8662750-8669797 Capsella rubella
Carub.0005s1644 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8662750-8663249 Capsella rubella
Carub.0005s1644 0.5kb downstream 0.5kb downstream 7048 true scaffold_5: 8663250-8670297 Capsella rubella
Carub.0005s1644 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8669798-8670297 Capsella rubella
Carub.0005s1644 1.0kb upstream 1.0kb upstream 7548 true scaffold_5: 8662250-8669797 Capsella rubella
Carub.0005s1644 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8662250-8663249 Capsella rubella
Carub.0005s1644 1.0kb downstream 1.0kb downstream 7548 true scaffold_5: 8663250-8670797 Capsella rubella
Carub.0005s1644 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8669798-8670797 Capsella rubella
Carub.0005s1644 2.0kb upstream 2.0kb upstream 8548 true scaffold_5: 8661250-8669797 Capsella rubella
Carub.0005s1644 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8661250-8663249 Capsella rubella
Carub.0005s1644 2.0kb downstream 2.0kb downstream 8548 true scaffold_5: 8663250-8671797 Capsella rubella
Carub.0005s1644 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8669798-8671797 Capsella rubella
Carub.0005s1644 5.0kb upstream 5.0kb upstream 11548 true scaffold_5: 8658250-8669797 Capsella rubella
Carub.0005s1644 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8658250-8663249 Capsella rubella
Carub.0005s1644 5.0kb downstream 5.0kb downstream 11548 true scaffold_5: 8663250-8674797 Capsella rubella
Carub.0005s1644 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8669798-8674797 Capsella rubella
Carub.0005s1644 10.0kb upstream 10.0kb upstream 16548 true scaffold_5: 8653250-8669797 Capsella rubella
Carub.0005s1644 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8653250-8663249 Capsella rubella
Carub.0005s1644 10.0kb downstream 10.0kb downstream 16548 true scaffold_5: 8663250-8679797 Capsella rubella
Carub.0005s1644 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8669798-8679797 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041485 5273 Angiosperm View MSA
122365867 5261 Brassicaceae View MSA
123838543 5264 Brassicales-Malvales View MSA
124340305 5266 SBM View MSA
124242784 5268 Malvidae View MSA
124062801 5270 Rosid View MSA
123743566 5271 Pentapetalae View MSA
122785750 5272 Eudicot View MSA
121348164 5274 Embryophyte View MSA
123427779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain