Gene : Bostr.3148s0254 B. stricta v1.2
Defline:  (1 of 31) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  254
Name:  ? Bostr.3148s0254 Secondary Identifier:  ? PAC:30655644
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3148s0254 0.5kb upstream 0.5kb upstream 1267 true Scaffold3148: 2251191-2252457 Boechera stricta
Bostr.3148s0254 0.5kb upstream 0.5kb upstream 500 false Scaffold3148: 2251958-2252457 Boechera stricta
Bostr.3148s0254 0.5kb downstream 0.5kb downstream 1267 true Scaffold3148: 2250691-2251957 Boechera stricta
Bostr.3148s0254 0.5kb downstream 0.5kb downstream 500 false Scaffold3148: 2250691-2251190 Boechera stricta
Bostr.3148s0254 1.0kb upstream 1.0kb upstream 1767 true Scaffold3148: 2251191-2252957 Boechera stricta
Bostr.3148s0254 1.0kb upstream 1.0kb upstream 1000 false Scaffold3148: 2251958-2252957 Boechera stricta
Bostr.3148s0254 1.0kb downstream 1.0kb downstream 1767 true Scaffold3148: 2250191-2251957 Boechera stricta
Bostr.3148s0254 1.0kb downstream 1.0kb downstream 1000 false Scaffold3148: 2250191-2251190 Boechera stricta
Bostr.3148s0254 2.0kb upstream 2.0kb upstream 2767 true Scaffold3148: 2251191-2253957 Boechera stricta
Bostr.3148s0254 2.0kb upstream 2.0kb upstream 2000 false Scaffold3148: 2251958-2253957 Boechera stricta
Bostr.3148s0254 2.0kb downstream 2.0kb downstream 2767 true Scaffold3148: 2249191-2251957 Boechera stricta
Bostr.3148s0254 2.0kb downstream 2.0kb downstream 2000 false Scaffold3148: 2249191-2251190 Boechera stricta
Bostr.3148s0254 5.0kb upstream 5.0kb upstream 5767 true Scaffold3148: 2251191-2256957 Boechera stricta
Bostr.3148s0254 5.0kb upstream 5.0kb upstream 5000 false Scaffold3148: 2251958-2256957 Boechera stricta
Bostr.3148s0254 5.0kb downstream 5.0kb downstream 5767 true Scaffold3148: 2246191-2251957 Boechera stricta
Bostr.3148s0254 5.0kb downstream 5.0kb downstream 5000 false Scaffold3148: 2246191-2251190 Boechera stricta
Bostr.3148s0254 10.0kb upstream 10.0kb upstream 10767 true Scaffold3148: 2251191-2261957 Boechera stricta
Bostr.3148s0254 10.0kb upstream 10.0kb upstream 10000 false Scaffold3148: 2251958-2261957 Boechera stricta
Bostr.3148s0254 10.0kb downstream 10.0kb downstream 10767 true Scaffold3148: 2241191-2251957 Boechera stricta
Bostr.3148s0254 10.0kb downstream 10.0kb downstream 10000 false Scaffold3148: 2241191-2251190 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122342962 5261 Brassicaceae View MSA
123783276 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain