Gene : orange1.1g008352m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC Genomic Order:  12
Name:  ? orange1.1g008352m.g Secondary Identifier:  ? PAC:18129664
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g008352m.g 0.5kb upstream 0.5kb upstream 5333 true scaffold00283: 207808-213140 Citrus sinensis
orange1.1g008352m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00283: 207808-208307 Citrus sinensis
orange1.1g008352m.g 0.5kb downstream 0.5kb downstream 5333 true scaffold00283: 208308-213640 Citrus sinensis
orange1.1g008352m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00283: 213141-213640 Citrus sinensis
orange1.1g008352m.g 1.0kb upstream 1.0kb upstream 5833 true scaffold00283: 207308-213140 Citrus sinensis
orange1.1g008352m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00283: 207308-208307 Citrus sinensis
orange1.1g008352m.g 1.0kb downstream 1.0kb downstream 5833 true scaffold00283: 208308-214140 Citrus sinensis
orange1.1g008352m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00283: 213141-214140 Citrus sinensis
orange1.1g008352m.g 2.0kb upstream 2.0kb upstream 6833 true scaffold00283: 206308-213140 Citrus sinensis
orange1.1g008352m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00283: 206308-208307 Citrus sinensis
orange1.1g008352m.g 2.0kb downstream 2.0kb downstream 6833 true scaffold00283: 208308-215140 Citrus sinensis
orange1.1g008352m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00283: 213141-215140 Citrus sinensis
orange1.1g008352m.g 5.0kb upstream 5.0kb upstream 9833 true scaffold00283: 203308-213140 Citrus sinensis
orange1.1g008352m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00283: 203308-208307 Citrus sinensis
orange1.1g008352m.g 5.0kb downstream 5.0kb downstream 9833 true scaffold00283: 208308-218140 Citrus sinensis
orange1.1g008352m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00283: 213141-218140 Citrus sinensis
orange1.1g008352m.g 10.0kb upstream 10.0kb upstream 14833 true scaffold00283: 198308-213140 Citrus sinensis
orange1.1g008352m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00283: 198308-208307 Citrus sinensis
orange1.1g008352m.g 10.0kb downstream 10.0kb downstream 9910 true scaffold00283: 208308-218217 Citrus sinensis
orange1.1g008352m.g 10.0kb downstream 10.0kb downstream 5077 false scaffold00283: 213141-218217 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351655 5266 SBM View MSA
124237250 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain