Protein Family : RNApolymerase sigma-subunit F 124237250

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30078.t000100 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC R. communis v0.1 3570   30078: 633727-637296
orange1.1g008352m.g (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC C. sinensis v1.1 4833   scaffold00283: 208308-213140
AT2G36990 (1 of 6) PF04539 - Sigma-70 region 3 (Sigma70_r3) A. thaliana TAIR10 SIGF 2882   Chr2: 15537258-15540139
Thhalv10016472m.g (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC E. salsugineum v1.0 3120   scaffold_10: 8989105-8992224
Ciclev10011376m.g (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC C. clementina v1.0 5033   scaffold_6: 9681477-9686509
Gorai.009G415400 (1 of 2) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC G. raimondii v2.1 3539   Chr09: 63898063-63901601
Gorai.006G165200 (1 of 2) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC G. raimondii v2.1 3321   Chr06: 42500097-42503417
Thecc1EG022198 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC T. cacao v1.1 3965   scaffold_5: 3106014-3109978
Araha.10539s0003 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC A. halleri v1.1 2785   Scaffold10539: 15327-18111
Cagra.0558s0014 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC C. grandiflora v1.1 2916   Scaffold558: 71247-74162
Brara.D02249 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC B. rapa FPsc v1.3 3297   A04: 18147244-18150540
Bostr.23794s0392 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC B. stricta v1.2 2893   Scaffold23794: 2263943-2266835
SapurV1A.0141s0230 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC S. purpurea v1.0 4393   chr06: 12085904-12090296
Manes.09G067500 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC M. esculenta v6.1 4599   Chromosome09: 9156856-9161454
AL4G33240 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC A. lyrata v2.1 2928   scaffold_4: 17637892-17640819
Potri.006G125700 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC P. trichocarpa v3.1 4589   Chr06: 10143065-10147653
Podel.06G135500 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC P. deltoides WV94 v2.1 4572   Chr06: 11142228-11146799
Carub.0004s1884 (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC C. rubella v1.1 2916   scaffold_4: 10539684-10542599

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10016472m E. salsugineum v1.0 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Gorai.006G165200.1 G. raimondii v2.1 124237250 RNApolymerase sigma-subunit F 2 5268 Malvidae
Carub.0004s1884.1.p C. rubella v1.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
30078.m002307 R. communis v0.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
orange1.1g008352m C. sinensis v1.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
AT2G36990.1 A. thaliana TAIR10 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Ciclev10011376m C. clementina v1.0 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Gorai.009G415400.1 G. raimondii v2.1 124237250 RNApolymerase sigma-subunit F 2 5268 Malvidae
Thecc1EG022198t1 T. cacao v1.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Araha.10539s0003.1.p A. halleri v1.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Cagra.0558s0014.1.p C. grandiflora v1.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Brara.D02249.1.p B. rapa FPsc v1.3 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Bostr.23794s0392.1.p B. stricta v1.2 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
SapurV1A.0141s0230.1.p S. purpurea v1.0 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Manes.09G067500.1.p M. esculenta v6.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
AL4G33240.t1 A. lyrata v2.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Potri.006G125700.3.p P. trichocarpa v3.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae
Podel.06G135500.1.p P. deltoides WV94 v2.1 124237250 RNApolymerase sigma-subunit F 1 5268 Malvidae