Gene : AL5G34890 A. lyrata v2.1
Defline:  (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC Genomic Order:  2191
Name:  ? AL5G34890 Secondary Identifier:  ? PAC:35918902
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G34890 0.5kb upstream 0.5kb upstream 3575   true scaffold_5: 16770026-16773600 Arabidopsis lyrata
AL5G34890 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 16773101-16773600 Arabidopsis lyrata
AL5G34890 0.5kb downstream 0.5kb downstream 3575   true scaffold_5: 16769526-16773100 Arabidopsis lyrata
AL5G34890 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 16769526-16770025 Arabidopsis lyrata
AL5G34890 1.0kb upstream 1.0kb upstream 4075   true scaffold_5: 16770026-16774100 Arabidopsis lyrata
AL5G34890 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 16773101-16774100 Arabidopsis lyrata
AL5G34890 1.0kb downstream 1.0kb downstream 4075   true scaffold_5: 16769026-16773100 Arabidopsis lyrata
AL5G34890 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 16769026-16770025 Arabidopsis lyrata
AL5G34890 2.0kb upstream 2.0kb upstream 5075   true scaffold_5: 16770026-16775100 Arabidopsis lyrata
AL5G34890 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 16773101-16775100 Arabidopsis lyrata
AL5G34890 2.0kb downstream 2.0kb downstream 5075   true scaffold_5: 16768026-16773100 Arabidopsis lyrata
AL5G34890 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 16768026-16770025 Arabidopsis lyrata
AL5G34890 5.0kb upstream 5.0kb upstream 8075   true scaffold_5: 16770026-16778100 Arabidopsis lyrata
AL5G34890 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 16773101-16778100 Arabidopsis lyrata
AL5G34890 5.0kb downstream 5.0kb downstream 8075   true scaffold_5: 16765026-16773100 Arabidopsis lyrata
AL5G34890 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 16765026-16770025 Arabidopsis lyrata
AL5G34890 10.0kb upstream 10.0kb upstream 13075   true scaffold_5: 16770026-16783100 Arabidopsis lyrata
AL5G34890 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 16773101-16783100 Arabidopsis lyrata
AL5G34890 10.0kb downstream 10.0kb downstream 13075   true scaffold_5: 16760026-16773100 Arabidopsis lyrata
AL5G34890 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 16760026-16770025 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368214 5261 Brassicaceae View MSA
123835228 5264 Brassicales-Malvales View MSA
124339233 5266 SBM View MSA
124241002 5268 Malvidae View MSA
124066758 5270 Rosid View MSA
123740141 5271 Pentapetalae View MSA
122790910 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain