Protein Family : RNApolymerase sigma-subunit C 124066758

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  28

28 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29794.t000067 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC R. communis v0.1 3978   29794: 374390-378367
Cucsa.160980 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. sativus v1.0 2436   scaffold01144: 1051714-1054149
orange1.1g009449m.g (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. sinensis v1.1 3828   scaffold00005: 1310765-1314592
AT3G53920 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC A. thaliana TAIR10 SIGC 3081   Chr3: 19960869-19963949
Thhalv10010251m.g (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC E. salsugineum v1.0 2990   scaffold_16: 921494-924483
Ciclev10007968m.g (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. clementina v1.0 3811   scaffold_1: 3567764-3571574
Gorai.010G103500 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC G. raimondii v2.1 5375   Chr10: 18789578-18794952
Araha.2363s0003 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC A. halleri v1.1 3007   Scaffold2363: 13959-16965
Cagra.2252s0020 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. grandiflora v1.1 3177   Scaffold2252: 71878-75054
Glyma.17G192200 (1 of 2) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC G. max Wm82.a2.v1 7996   Chr17: 27557800-27565795
Brara.D00505 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC B. rapa FPsc v1.3 3049   A04: 3761594-3764642
Bostr.11793s0002 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC B. stricta v1.2 3179   Scaffold11793: 36876-40054
Medtr1g007370 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC M. truncatula Mt4.0v1 4288   chr1: 306478-310765
SapurV1A.0890s0100 (1 of 2) K03093 - RNA polymerase sigma factor (SIGMA70) S. purpurea v1.0 5506   chr06: 22596550-22602055
Eucgr.C00620 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC E. grandis v2.0 4506   Chr03: 11596663-11601168
Prupe.1G443200 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. persica v2.1 3597   Pp01: 37585636-37589232
Manes.03G057200 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC M. esculenta v6.1 3297   Chromosome03: 5304160-5307456
AL5G34890 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC A. lyrata v2.1 3075   scaffold_5: 16770026-16773100
Tp57577_TGAC_v2_gene24527 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC T. pratense v2 3591   Tp57577_TGAC_v2_LG1: 9261640-9265230
Phvul.001G059800 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. vulgaris v2.1 5162   Chr01: 6941908-6947069
Potri.006G234400 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. trichocarpa v3.1 4997   Chr06: 24412663-24417659
Podel.06G247200 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. deltoides WV94 v2.1 5469   Chr06: 24906386-24911854
VIT_204s0008g00600 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC V. vinifera v2.1 4785   chr4: 531778-536562
Carub.0005s2049 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC C. rubella v1.1 3152   scaffold_5: 10118458-10121609
MD15G1089100 (1 of 3) K03093 - RNA polymerase sigma factor (SIGMA70) M. domestica v1.1 3483   Chr15: 6201553-6205035
MD08G1108600 (1 of 3) K03093 - RNA polymerase sigma factor (SIGMA70) M. domestica v1.1 4087   Chr08: 9561339-9565425
Ca_14896 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC C. arietinum v1.0 4650   Ca4: 40229772-40234421
gene09028-v2.0.a2-hybrid (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC F. vesca v2.0.a2 3415   Fvb2: 25571465-25574879

28 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10007968m C. clementina v1.0 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Brara.D00505.1.p B. rapa FPsc v1.3 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Medtr1g007370.1 M. truncatula Mt4.0v1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
SapurV1A.0890s0100.1.p S. purpurea v1.0 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Eucgr.C00620.1.p E. grandis v2.0 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Potri.006G234400.1.p P. trichocarpa v3.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Podel.06G247200.1.p P. deltoides WV94 v2.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Ca_14896 C. arietinum v1.0 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
29794.m003368 R. communis v0.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Cucsa.160980.1 C. sativus v1.0 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
orange1.1g009449m C. sinensis v1.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
AT3G53920.1 A. thaliana TAIR10 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Thhalv10010251m E. salsugineum v1.0 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Gorai.010G103500.1 G. raimondii v2.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Araha.2363s0003.1.p A. halleri v1.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Cagra.2252s0020.1.p C. grandiflora v1.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Glyma.17G192200.1.p G. max Wm82.a2.v1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Bostr.11793s0002.1.p B. stricta v1.2 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Prupe.1G443200.1.p P. persica v2.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Manes.03G057200.1.p M. esculenta v6.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
AL5G34890.t1 A. lyrata v2.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Tp57577_TGAC_v2_mRNA25372 T. pratense v2 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Phvul.001G059800.1.p P. vulgaris v2.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
VIT_204s0008g00600.1 V. vinifera v2.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
Carub.0005s2049.1.p C. rubella v1.1 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid
MD15G1089100 M. domestica v1.1 124066758 RNApolymerase sigma-subunit C 2 5270 Rosid
MD08G1108600 M. domestica v1.1 124066758 RNApolymerase sigma-subunit C 2 5270 Rosid
gene09028-v2.0.a2-hybrid.t2 F. vesca v2.0.a2 124066758 RNApolymerase sigma-subunit C 1 5270 Rosid