Gene : orange1.1g009449m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC Genomic Order:  155
Name:  ? orange1.1g009449m.g Secondary Identifier:  ? PAC:18096697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009449m.g 0.5kb upstream 0.5kb upstream 4328 true scaffold00005: 1310765-1315092 Citrus sinensis
orange1.1g009449m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00005: 1314593-1315092 Citrus sinensis
orange1.1g009449m.g 0.5kb downstream 0.5kb downstream 4328 true scaffold00005: 1310265-1314592 Citrus sinensis
orange1.1g009449m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00005: 1310265-1310764 Citrus sinensis
orange1.1g009449m.g 1.0kb upstream 1.0kb upstream 4828 true scaffold00005: 1310765-1315592 Citrus sinensis
orange1.1g009449m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00005: 1314593-1315592 Citrus sinensis
orange1.1g009449m.g 1.0kb downstream 1.0kb downstream 4828 true scaffold00005: 1309765-1314592 Citrus sinensis
orange1.1g009449m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00005: 1309765-1310764 Citrus sinensis
orange1.1g009449m.g 2.0kb upstream 2.0kb upstream 5828 true scaffold00005: 1310765-1316592 Citrus sinensis
orange1.1g009449m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00005: 1314593-1316592 Citrus sinensis
orange1.1g009449m.g 2.0kb downstream 2.0kb downstream 5828 true scaffold00005: 1308765-1314592 Citrus sinensis
orange1.1g009449m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00005: 1308765-1310764 Citrus sinensis
orange1.1g009449m.g 5.0kb upstream 5.0kb upstream 8828 true scaffold00005: 1310765-1319592 Citrus sinensis
orange1.1g009449m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00005: 1314593-1319592 Citrus sinensis
orange1.1g009449m.g 5.0kb downstream 5.0kb downstream 8828 true scaffold00005: 1305765-1314592 Citrus sinensis
orange1.1g009449m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00005: 1305765-1310764 Citrus sinensis
orange1.1g009449m.g 10.0kb upstream 10.0kb upstream 13828 true scaffold00005: 1310765-1324592 Citrus sinensis
orange1.1g009449m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00005: 1314593-1324592 Citrus sinensis
orange1.1g009449m.g 10.0kb downstream 10.0kb downstream 13828 true scaffold00005: 1300765-1314592 Citrus sinensis
orange1.1g009449m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00005: 1300765-1310764 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339233 5266 SBM View MSA
124241002 5268 Malvidae View MSA
124066758 5270 Rosid View MSA
123740141 5271 Pentapetalae View MSA
122790910 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain