Protein Family : RNApolymerase sigma-subunit C 123740141

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  40

40 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29794.t000067 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC R. communis v0.1 3978   29794: 374390-378367
Cucsa.160980 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. sativus v1.0 2436   scaffold01144: 1051714-1054149
orange1.1g009449m.g (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. sinensis v1.1 3828   scaffold00005: 1310765-1314592
AT3G53920 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC A. thaliana TAIR10 SIGC 3081   Chr3: 19960869-19963949
Thhalv10010251m.g (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC E. salsugineum v1.0 2990   scaffold_16: 921494-924483
Ciclev10007968m.g (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. clementina v1.0 3811   scaffold_1: 3567764-3571574
Gorai.010G103500 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC G. raimondii v2.1 5375   Chr10: 18789578-18794952
Migut.A00167 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC M. guttatus v2.0 3712   scaffold_1: 801803-805514
Araha.2363s0003 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC A. halleri v1.1 3007   Scaffold2363: 13959-16965
Cagra.2252s0020 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC C. grandiflora v1.1 3177   Scaffold2252: 71878-75054
Glyma.17G192200 (1 of 2) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC G. max Wm82.a2.v1 7996   Chr17: 27557800-27565795
Brara.D00505 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC B. rapa FPsc v1.3 3049   A04: 3761594-3764642
Bostr.11793s0002 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC B. stricta v1.2 3179   Scaffold11793: 36876-40054
Medtr1g007370 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC M. truncatula Mt4.0v1 4288   chr1: 306478-310765
SapurV1A.0890s0100 (1 of 2) K03093 - RNA polymerase sigma factor (SIGMA70) S. purpurea v1.0 5506   chr06: 22596550-22602055
Eucgr.C00620 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC E. grandis v2.0 4506   Chr03: 11596663-11601168
Prupe.1G443200 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. persica v2.1 3597   Pp01: 37585636-37589232
Manes.03G057200 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC M. esculenta v6.1 3297   Chromosome03: 5304160-5307456
Kalax.0036s0126 (1 of 2) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC K. laxiflora v1.1 3688   scaffold_36: 989575-993262
Kalax.0055s0110 (1 of 2) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC K. laxiflora v1.1 3756   scaffold_55: 801420-805175
Kaladp0011s0643 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC K. fedtschenkoi v1.1 2826   Scaffold_11: 4223459-4226284
AL5G34890 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC A. lyrata v2.1 3075   scaffold_5: 16770026-16773100
Tp57577_TGAC_v2_gene24527 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC T. pratense v2 3591   Tp57577_TGAC_v2_LG1: 9261640-9265230
DCAR_004457 (1 of 1) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC D. carota v2.0 2733   DCARv2_Chr1: 48200822-48203554
Solyc08g065970.2 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC S. lycopersicum ITAG2.4 5353   SL2.50ch08: 54369657-54375009
AUR62009211 (1 of 2) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC C. quinoa v1.0 5173   C_Quinoa_Scaffold_3674: 2668621-2673793
AUR62040209 (1 of 2) PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC C. quinoa v1.0 5093   C_Quinoa_Scaffold_2344: 203680-208772
Phvul.001G059800 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. vulgaris v2.1 5162   Chr01: 6941908-6947069
Potri.006G234400 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. trichocarpa v3.1 4997   Chr06: 24412663-24417659
Podel.06G247200 (1 of 1) PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC P. deltoides WV94 v2.1 5469   Chr06: 24906386-24911854

40 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10007968m C. clementina v1.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Brara.D00505.1.p B. rapa FPsc v1.3 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Medtr1g007370.1 M. truncatula Mt4.0v1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
SapurV1A.0890s0100.1.p S. purpurea v1.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Eucgr.C00620.1.p E. grandis v2.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Kalax.0036s0126.1.p K. laxiflora v1.1 123740141 RNApolymerase sigma-subunit C 2 5271 Pentapetalae
Kalax.0055s0110.1.p K. laxiflora v1.1 123740141 RNApolymerase sigma-subunit C 2 5271 Pentapetalae
Kaladp0011s0643.1.p K. fedtschenkoi v1.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
DCAR_004457 D. carota v2.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
AUR62040209-RA C. quinoa v1.0 123740141 RNApolymerase sigma-subunit C 2 5271 Pentapetalae
AUR62009211-RA C. quinoa v1.0 123740141 RNApolymerase sigma-subunit C 2 5271 Pentapetalae
Potri.006G234400.1.p P. trichocarpa v3.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Podel.06G247200.1.p P. deltoides WV94 v2.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Oeu057704.1 O. europaea v1.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Lsat_1_v5_gn_6_7620.1 L. sativa V8 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Ca_14896 C. arietinum v1.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
HanXRQChr02g0047941 H. annuus r1.2 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
29794.m003368 R. communis v0.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Cucsa.160980.1 C. sativus v1.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
orange1.1g009449m C. sinensis v1.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
AT3G53920.1 A. thaliana TAIR10 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Thhalv10010251m E. salsugineum v1.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Gorai.010G103500.1 G. raimondii v2.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Migut.A00167.1.p M. guttatus v2.0 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Araha.2363s0003.1.p A. halleri v1.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Cagra.2252s0020.1.p C. grandiflora v1.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Glyma.17G192200.1.p G. max Wm82.a2.v1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Bostr.11793s0002.1.p B. stricta v1.2 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Prupe.1G443200.1.p P. persica v2.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae
Manes.03G057200.1.p M. esculenta v6.1 123740141 RNApolymerase sigma-subunit C 1 5271 Pentapetalae