Protein Family : RING/U-box superfamily protein 124248129

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  43

43 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29717.t000007 (1 of 35) KOG1493 - Anaphase-promoting complex (APC), subunit 11 R. communis v0.1 684   29717: 49005-49688
28644.t000014 (1 of 8) PF17123 - RING-like zinc finger (zf-RING_11) R. communis v0.1 619   28644: 71162-71780
orange1.1g042810m.g (1 of 4) PF12678 - RING-H2 zinc finger (zf-rbx1) C. sinensis v1.1 693   scaffold00002: 1525364-1526056
AT4G05350 (1 of 5) PTHR22763//PTHR22763:SF63 - RING ZINC FINGER PROTEIN // C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED A. thaliana TAIR10 621   Chr4: 2726910-2727530
AT4G12210 (1 of 5) PTHR22763//PTHR22763:SF63 - RING ZINC FINGER PROTEIN // C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED A. thaliana TAIR10 612   Chr4: 7281308-7281919
AT4G12140 (1 of 5) PTHR22763//PTHR22763:SF63 - RING ZINC FINGER PROTEIN // C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED A. thaliana TAIR10 609   Chr4: 7266546-7267154
AT4G18110 (1 of 2) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 A. thaliana TAIR10 642   Chr4: 10037077-10037718
Thhalv10027120m.g (1 of 7) KOG0320 - Predicted E3 ubiquitin ligase E. salsugineum v1.0 681   scaffold_1: 9678420-9679100
Thhalv10029147m.g (1 of 4) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED E. salsugineum v1.0 573   scaffold_3: 3345786-3346358
Thhalv10029381m.g (1 of 4) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED E. salsugineum v1.0 546   scaffold_3: 3324137-3324682
Ciclev10003843m.g (1 of 5) PF12678 - RING-H2 zinc finger (zf-rbx1) C. clementina v1.0 693   scaffold_5: 39584132-39584824
Araha.16821s0001   A. halleri v1.1 540   Scaffold16821: 20-559
Araha.9206s0003 (1 of 1) KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component A. halleri v1.1 609   Scaffold9206: 7405-8013
Araha.9206s0002 (1 of 5) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED A. halleri v1.1 627   Scaffold9206: 4491-5117
Cagra.3744s0007 (1 of 3) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED C. grandiflora v1.1 618   Scaffold3744: 17377-17994
Cagra.3744s0006 (1 of 3) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED C. grandiflora v1.1 639   Scaffold3744: 16173-16811
Cagra.7393s0002 (1 of 223) PF13639 - Ring finger domain (zf-RING_2) C. grandiflora v1.1 609   Scaffold7393: 6642-7250
Brara.H01359 (1 of 389) PF13639 - Ring finger domain (zf-RING_2) B. rapa FPsc v1.3 1512   A08: 14655862-14657373
Brara.I02273 (1 of 5) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED B. rapa FPsc v1.3 693   A09: 17378699-17379391
Brara.I02272 (1 of 5) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED B. rapa FPsc v1.3 699   A09: 17376335-17377033
Bostr.13404s0022 (1 of 29) KOG1493 - Anaphase-promoting complex (APC), subunit 11 B. stricta v1.2 3136   Scaffold13404: 415592-418727
Bostr.25463s0092 (1 of 2) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED B. stricta v1.2 609   Scaffold25463: 787430-788038
SapurV1A.0179s0300 (1 of 6) PTHR14155:SF138 - GH10160P S. purpurea v1.0 721   chr13: 14191015-14191735
Manes.04G105900 (1 of 73) PTHR22763 - RING ZINC FINGER PROTEIN M. esculenta v6.1 624   Chromosome04: 24161808-24162431
Manes.04G106800 (1 of 6) PTHR22763:SF60 - PROTEIN H05L14.2 M. esculenta v6.1 687   Chromosome04: 24258496-24259182
Manes.04G107000 (1 of 6) PTHR22763:SF60 - PROTEIN H05L14.2 M. esculenta v6.1 678   Chromosome04: 24264306-24264983
Manes.04G106900 (1 of 73) PTHR22763 - RING ZINC FINGER PROTEIN M. esculenta v6.1 687   Chromosome04: 24261753-24262439
Manes.03G042200 (1 of 6) PTHR22763:SF60 - PROTEIN H05L14.2 M. esculenta v6.1 681   Chromosome03: 3419582-3420262
Manes.02G027200 (1 of 6) PTHR22763:SF60 - PROTEIN H05L14.2 M. esculenta v6.1 636   Chromosome02: 2099881-2100516
Manes.01G257700 (1 of 6) PTHR22763:SF60 - PROTEIN H05L14.2 M. esculenta v6.1 624   Chromosome01: 33188989-33189612

43 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g042810m C. sinensis v1.1 124248129 RING/U-box superfamily protein 1 5268 Malvidae
AT4G12210.1 A. thaliana TAIR10 124248129 RING/U-box superfamily protein 4 5268 Malvidae
Thhalv10027120m E. salsugineum v1.0 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Thhalv10029381m E. salsugineum v1.0 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Araha.9206s0002.1.p A. halleri v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Araha.16821s0001.1.p A. halleri v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Brara.I02273.1.p B. rapa FPsc v1.3 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Manes.04G107000.1.p M. esculenta v6.1 124248129 RING/U-box superfamily protein 8 5268 Malvidae
Manes.04G106900.1.p M. esculenta v6.1 124248129 RING/U-box superfamily protein 8 5268 Malvidae
Manes.12G069500.1.p M. esculenta v6.1 124248129 RING/U-box superfamily protein 8 5268 Malvidae
Manes.01G257700.1.p M. esculenta v6.1 124248129 RING/U-box superfamily protein 8 5268 Malvidae
Manes.03G042200.1.p M. esculenta v6.1 124248129 RING/U-box superfamily protein 8 5268 Malvidae
AL6G47070.t1 A. lyrata v2.1 124248129 RING/U-box superfamily protein 4 5268 Malvidae
AL7G36330.t1 A. lyrata v2.1 124248129 RING/U-box superfamily protein 4 5268 Malvidae
AL2G11050.t1 A. lyrata v2.1 124248129 RING/U-box superfamily protein 4 5268 Malvidae
Podel.13G123700.1.p P. deltoides WV94 v2.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Carub.0006s3133.1.p C. rubella v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
28644.m000907 R. communis v0.1 124248129 RING/U-box superfamily protein 2 5268 Malvidae
29717.m000227 R. communis v0.1 124248129 RING/U-box superfamily protein 2 5268 Malvidae
AT4G18110.1 A. thaliana TAIR10 124248129 RING/U-box superfamily protein 4 5268 Malvidae
AT4G05350.1 A. thaliana TAIR10 124248129 RING/U-box superfamily protein 4 5268 Malvidae
AT4G12140.1 A. thaliana TAIR10 124248129 RING/U-box superfamily protein 4 5268 Malvidae
Thhalv10029147m E. salsugineum v1.0 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Ciclev10003843m C. clementina v1.0 124248129 RING/U-box superfamily protein 1 5268 Malvidae
Araha.9206s0003.1.p A. halleri v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Cagra.3744s0006.1.p C. grandiflora v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Cagra.7393s0002.1.p C. grandiflora v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Cagra.3744s0007.1.p C. grandiflora v1.1 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Brara.H01359.1.p B. rapa FPsc v1.3 124248129 RING/U-box superfamily protein 3 5268 Malvidae
Brara.I02272.1.p B. rapa FPsc v1.3 124248129 RING/U-box superfamily protein 3 5268 Malvidae