Protein Family : TATA-box binding protein (TBP), component of TFIID and TFIIIB 122199665

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  14

14 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.3G397000 (1 of 4) PTHR10126 - TATA-BOX BINDING PROTEIN S. italica v2.2 3837   scaffold_3: 49775847-49779683
Seita.9G150100 (1 of 4) PTHR10126 - TATA-BOX BINDING PROTEIN S. italica v2.2 4244   scaffold_9: 9770492-9774735
Zm00008a004779 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Z. mays PH207 v1.1 5220   chr01: 262074133-262079352
Pavir.9NG246300 (1 of 5) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. virgatum v4.1 4537   Chr09N: 24905077-24909613
Sobic.008G179700 (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) S. bicolor v3.1.1 4048   Chr08: 61310664-61314711
Sobic.001G148101 (1 of 4) PTHR10126 - TATA-BOX BINDING PROTEIN S. bicolor v3.1.1 2325   Chr01: 11932099-11934423
Zm00001d033472 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Z. mays RefGen_V4 5245   1: 263622481-263627725
Pahal.9G145900 (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. hallii v3.1 4444   Chr09: 8950882-8955325
PhHAL.9G142000 (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. hallii HAL v2.1 4546   Chr09: 8572643-8577188
Misin01G144900 (1 of 5) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) M. sinensis v7.1 5350   Chr01: 27688330-27693679
Misin02G115500 (1 of 5) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) M. sinensis v7.1 11051   Chr02: 21220426-21231476
Misin14G169500 (1 of 5) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) M. sinensis v7.1 3833   Chr14: 60110017-60113849
Sevir.9G148550 (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) S. viridis v2.1 4645   Chr_09: 9574823-9579467
Sevir.3G415100 (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) S. viridis v2.1 4073   Chr_03: 49399991-49404063

14 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.9G150100.1.p S. italica v2.2 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 2 5267 Panicoideae
Seita.3G397000.1.p S. italica v2.2 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 2 5267 Panicoideae
Zm00008a004779_P01 Z. mays PH207 v1.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 1 5267 Panicoideae
Pavir.9NG246300.1.p P. virgatum v4.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 1 5267 Panicoideae
Sobic.008G179700.1.p S. bicolor v3.1.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 2 5267 Panicoideae
Sobic.001G148101.1.p S. bicolor v3.1.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 2 5267 Panicoideae
Zm00001d033472_P004 Z. mays RefGen_V4 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 1 5267 Panicoideae
Pahal.9G145900.1.p P. hallii v3.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 1 5267 Panicoideae
PhHAL.9G142000.1.p P. hallii HAL v2.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 1 5267 Panicoideae
Misin01G144900.1.p M. sinensis v7.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 3 5267 Panicoideae
Misin02G115500.1.p M. sinensis v7.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 3 5267 Panicoideae
Misin14G169500.1.p M. sinensis v7.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 3 5267 Panicoideae
Sevir.9G148550.1.p S. viridis v2.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 2 5267 Panicoideae
Sevir.3G415100.1.p S. viridis v2.1 122199665 TATA-box binding protein (TBP), component of TFIID and TFIIIB 2 5267 Panicoideae