Gene : Bostr.14729s0001 B. stricta v1.2
Defline:  (1 of 31) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  1
Name:  ? Bostr.14729s0001 Secondary Identifier:  ? PAC:30669782
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.14729s0001 0.5kb upstream 0.5kb upstream 1073 true Scaffold14729: 52-1124 Boechera stricta
Bostr.14729s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold14729: 625-1124 Boechera stricta
Bostr.14729s0001 0.5kb downstream 0.5kb downstream 624 true Scaffold14729: 1-624 Boechera stricta
Bostr.14729s0001 0.5kb downstream 0.5kb downstream 51 false Scaffold14729: 1-51 Boechera stricta
Bostr.14729s0001 1.0kb upstream 1.0kb upstream 1122 true Scaffold14729: 52-1173 Boechera stricta
Bostr.14729s0001 1.0kb upstream 1.0kb upstream 549 false Scaffold14729: 625-1173 Boechera stricta
Bostr.14729s0001 1.0kb downstream 1.0kb downstream 624 true Scaffold14729: 1-624 Boechera stricta
Bostr.14729s0001 1.0kb downstream 1.0kb downstream 51 false Scaffold14729: 1-51 Boechera stricta
Bostr.14729s0001 2.0kb upstream 2.0kb upstream 1122 true Scaffold14729: 52-1173 Boechera stricta
Bostr.14729s0001 2.0kb upstream 2.0kb upstream 549 false Scaffold14729: 625-1173 Boechera stricta
Bostr.14729s0001 2.0kb downstream 2.0kb downstream 624 true Scaffold14729: 1-624 Boechera stricta
Bostr.14729s0001 2.0kb downstream 2.0kb downstream 51 false Scaffold14729: 1-51 Boechera stricta
Bostr.14729s0001 5.0kb upstream 5.0kb upstream 1122 true Scaffold14729: 52-1173 Boechera stricta
Bostr.14729s0001 5.0kb upstream 5.0kb upstream 549 false Scaffold14729: 625-1173 Boechera stricta
Bostr.14729s0001 5.0kb downstream 5.0kb downstream 624 true Scaffold14729: 1-624 Boechera stricta
Bostr.14729s0001 5.0kb downstream 5.0kb downstream 51 false Scaffold14729: 1-51 Boechera stricta
Bostr.14729s0001 10.0kb upstream 10.0kb upstream 1122 true Scaffold14729: 52-1173 Boechera stricta
Bostr.14729s0001 10.0kb upstream 10.0kb upstream 549 false Scaffold14729: 625-1173 Boechera stricta
Bostr.14729s0001 10.0kb downstream 10.0kb downstream 624 true Scaffold14729: 1-624 Boechera stricta
Bostr.14729s0001 10.0kb downstream 10.0kb downstream 51 false Scaffold14729: 1-51 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122342962 5261 Brassicaceae View MSA
123783276 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain