Protein Family : sigma factor E 124344212

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  13
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13 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g010092m.g (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. sinensis v1.1 4184   scaffold00104: 274203-278386
AT5G24120 (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL A. thaliana TAIR10 SIGE 2679   Chr5: 8157551-8160229
Thhalv10004166m.g (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL E. salsugineum v1.0 2906   scaffold_6: 3081817-3084722
Ciclev10004760m.g (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. clementina v1.0 4159   scaffold_9: 30040457-30044615
Gorai.008G270500 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL G. raimondii v2.1 3489   Chr08: 54948050-54951538
Thecc1EG015349 (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL T. cacao v1.1 4439   scaffold_3: 27479806-27484244
Araha.11104s0003 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL A. halleri v1.1 2777   Scaffold11104: 9347-12123
Cagra.8922s0001 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. grandiflora v1.1 2666   Scaffold8922: 2-2667
Brara.F02635 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL B. rapa FPsc v1.3 2538   A06: 21799788-21802325
Brara.I00582 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL B. rapa FPsc v1.3 3347   A09: 3263992-3267338
Bostr.10199s0021 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL B. stricta v1.2 2827   Scaffold10199: 172803-175629
AL6G35480 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL A. lyrata v2.1 4487   scaffold_6: 10385985-10390471
Carub.0006s2185 (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. rubella v1.1 2278   scaffold_6: 8179801-8182078

13 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g010092m C. sinensis v1.1 124344212 sigma factor E 1 5266 SBM
AT5G24120.1 A. thaliana TAIR10 124344212 sigma factor E 1 5266 SBM
Thecc1EG015349t1 T. cacao v1.1 124344212 sigma factor E 1 5266 SBM
Thhalv10004166m E. salsugineum v1.0 124344212 sigma factor E 1 5266 SBM
Ciclev10004760m C. clementina v1.0 124344212 sigma factor E 1 5266 SBM
Gorai.008G270500.1 G. raimondii v2.1 124344212 sigma factor E 1 5266 SBM
Araha.11104s0003.1.p A. halleri v1.1 124344212 sigma factor E 1 5266 SBM
Cagra.8922s0001.1.p C. grandiflora v1.1 124344212 sigma factor E 1 5266 SBM
Brara.F02635.1.p B. rapa FPsc v1.3 124344212 sigma factor E 2 5266 SBM
Brara.I00582.1.p B. rapa FPsc v1.3 124344212 sigma factor E 2 5266 SBM
Bostr.10199s0021.1.p B. stricta v1.2 124344212 sigma factor E 1 5266 SBM
AL6G35480.t1 A. lyrata v2.1 124344212 sigma factor E 1 5266 SBM
Carub.0006s2185.1.p C. rubella v1.1 124344212 sigma factor E 1 5266 SBM