Protein Family : non-photochemical quenching 1 124344334

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  12

12 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g011550m.g (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC C. sinensis v1.1 5104   scaffold00375: 86171-91274
AT1G08550 (1 of 1) K09839 - violaxanthin de-epoxidase (VDE, NPQ1) A. thaliana TAIR10 NPQ1 2608   Chr1: 2706924-2709531
Thhalv10007587m.g (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC E. salsugineum v1.0 3446   scaffold_5: 12878562-12882007
Ciclev10019925m.g (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC C. clementina v1.0 5130   scaffold_3: 40937725-40942854
Gorai.007G268500 (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC G. raimondii v2.1 3558   Chr07: 44975407-44978964
Thecc1EG026037 (1 of 1) K09839 - violaxanthin de-epoxidase (VDE, NPQ1) T. cacao v1.1 4993   scaffold_5: 36183119-36188111
Araha.12231s0002 (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC A. halleri v1.1 2429   Scaffold12231: 3646-6074
Cagra.4395s0045 (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC C. grandiflora v1.1 2398   Scaffold4395: 178332-180729
Brara.F00535 (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC B. rapa FPsc v1.3 2667   A06: 3195036-3197702
Bostr.25219s0089 (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC B. stricta v1.2 2330   Scaffold25219: 433175-435504
AL1G18980 (1 of 1) K09839 - violaxanthin de-epoxidase (VDE, NPQ1) A. lyrata v2.1 2604   scaffold_1: 3226296-3228899
Carub.0001s0791 (1 of 1) K09839 - violaxanthin de-epoxidase (VDE, NPQ1) C. rubella v1.1 2374   scaffold_1: 2787886-2790259

12 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10019925m C. clementina v1.0 124344334 non-photochemical quenching 1 1 5266 SBM
Thecc1EG026037t1 T. cacao v1.1 124344334 non-photochemical quenching 1 1 5266 SBM
Araha.12231s0002.1.p A. halleri v1.1 124344334 non-photochemical quenching 1 1 5266 SBM
orange1.1g011550m C. sinensis v1.1 124344334 non-photochemical quenching 1 1 5266 SBM
AT1G08550.1 A. thaliana TAIR10 124344334 non-photochemical quenching 1 1 5266 SBM
Thhalv10007587m E. salsugineum v1.0 124344334 non-photochemical quenching 1 1 5266 SBM
Gorai.007G268500.1 G. raimondii v2.1 124344334 non-photochemical quenching 1 1 5266 SBM
Cagra.4395s0045.1.p C. grandiflora v1.1 124344334 non-photochemical quenching 1 1 5266 SBM
Brara.F00535.1.p B. rapa FPsc v1.3 124344334 non-photochemical quenching 1 1 5266 SBM
Bostr.25219s0089.1.p B. stricta v1.2 124344334 non-photochemical quenching 1 1 5266 SBM
AL1G18980.t1 A. lyrata v2.1 124344334 non-photochemical quenching 1 1 5266 SBM
Carub.0001s0791.1.p C. rubella v1.1 124344334 non-photochemical quenching 1 1 5266 SBM